10.13012/B2IDB-9797270_V1
Data for: A molecular phylogenetic analysis of the genera of fruit doves and their allies using dense taxonomic sampling
Nowak, Jennifer E.
Jennifer E.
Nowak
Sweet, Andrew D.
Andrew D.
Sweet
0000-0003-2765-7021
Weckstein, Jason D.
Jason D.
Weckstein
Johnson, Kevin P.
Kevin P.
Johnson
University of Illinois
Sweet, Andrew D.
Andrew D.
Sweet
0000-0003-2765-7021
U.S. National Science Foundation (NSF)
https://doi.org/10.13039/100000001
DEB-0118794
U.S. National Science Foundation (NSF)
https://doi.org/10.13039/100000001
DEB-0612938
U.S. National Science Foundation (NSF)
https://doi.org/10.13039/100000001
DEB-1050706
U.S. National Science Foundation (NSF)
https://doi.org/10.13039/100000001
DEB-1239788
U.S. National Science Foundation (NSF)
https://doi.org/10.13039/100000001
DEB-1342604
University of Illinois at Urbana-Champaign
2019
Dataset
fruit doves
multiple sequence alignment
phylogeny
Aves: Columbidae
2019-08-13
1
CC0 1.0 Universal Public Domain Dedication (CC0 1.0)
Multiple sequence alignments from concatenated nuclear and mitochondrial genes and resulting phylogenetic tree files of fruit doves and their close relatives. Files include: BEAST input XML file (fruit_dove_beast_input.xml); a maximum clade credibility tree from a BEAST analysis (fruit_dove_beast_mcc.tre); concatenated multiple sequence alignment NEXUS files for the novel dataset (fruit_dove_concatenated_alignment.nex, 76 taxa, 4,277 characters) and the dataset with additional sequences (fruit_dove_plus_cibois_data_concatenated_alignment.nex, 204 taxa, 4,277 characters), both of which contain a MrBayes block including partition information; and 50% majority-rule consensus trees generated from MrBayes analyses, using the NEXUS alignment files as inputs (fruit_dove_mrbayes_consensus.tre, fruit_dove_plus_cibois_data_mrbayes_consensus.tre).
10.21900/j.inhs.v42.93