{"data":{"id":"10.6084/m9.figshare.c.4234010","type":"dois","attributes":{"doi":"10.6084/m9.figshare.c.4234010","prefix":"10.6084","suffix":"m9.figshare.c.4234010","identifiers":[{"identifier":"https://doi.org/10.6084/m9.figshare.c.4234010","identifierType":"DOI"}],"alternateIdentifiers":[{"alternateIdentifierType":"DOI","alternateIdentifier":"https://doi.org/10.6084/m9.figshare.c.4234010"}],"creators":[{"name":"Yang, Bo","nameType":"Personal","givenName":"Bo","familyName":"Yang","affiliation":[],"nameIdentifiers":[]},{"name":"Liu, Chao","nameType":"Personal","givenName":"Chao","familyName":"Liu","affiliation":[],"nameIdentifiers":[]},{"name":"Wenfeng Zheng","affiliation":[],"nameIdentifiers":[]},{"name":"Liu, Shan","nameType":"Personal","givenName":"Shan","familyName":"Liu","affiliation":[],"nameIdentifiers":[]},{"name":"Keli Huang","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Reconstructing 3D heart surface with stereo-endoscope by learning eigen-shapes"}],"publisher":"Figshare","container":{},"publicationYear":2018,"subjects":[{"subject":"90399 Biomedical Engineering not elsewhere classified","subjectScheme":"FOR"},{"subject":"FOS: Medical engineering","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"80104 Computer Vision","subjectScheme":"FOR"},{"subject":"FOS: Computer and information sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"90602 Control Systems, Robotics and Automation","subjectScheme":"FOR"},{"subject":"FOS: Electrical engineering, electronic engineering, information engineering","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"}],"contributors":[],"dates":[{"date":"2018-09-16","dateType":"Created"},{"date":"2018-11-13","dateType":"Updated"},{"date":"2018","dateType":"Issued"}],"language":null,"types":{"ris":"GEN","bibtex":"misc","citeproc":"article","schemaOrg":"Collection","resourceType":"Collection","resourceTypeGeneral":"Collection"},"relatedIdentifiers":[{"relationType":"IsSupplementTo","relatedIdentifier":"10.1364/boe.9.006222","relatedIdentifierType":"DOI"}],"relatedItems":[],"sizes":[],"formats":[],"version":null,"rightsList":[{"rights":"CC BY 4.0","rightsUri":"https://creativecommons.org/licenses/by/4.0"}],"descriptions":[{"description":"An efficient approach to dynamically reconstruct Region of Interest (ROI) on beating heart from stereo-endoscopic video is developed. A ROI is first pre-reconstructed with a decoupled high-rank thin plate spline model. Eigen-shapes are learned from the pre-reconstructed data by using Principal Component Analysis (PCA) to build a low-rank statistical deformable model for reconstructing subsequent frames. The linear transferability of PCA is proved, which allows fast eigen-shape learning. A general dynamic reconstruction framework is developed that formulates ROI reconstruction as an optimization problem of model parameters, and an efficient second-order minimization algorithm is derived to iteratively solve it. The performance of the proposed method is finally validated on stereo-endoscopic videos recorded by da Vinci® robots.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://figshare.com/collections/Reconstructing_3D_heart_surface_with_stereo-endoscope_by_learning_eigen-shapes/4234010","contentUrl":null,"metadataVersion":1,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2018-11-13T14:31:45.000Z","registered":"2018-11-13T14:31:46.000Z","published":"2018","updated":"2020-07-14T16:46:26.000Z"},"relationships":{"client":{"data":{"id":"figshare.ars","type":"clients"}},"provider":{"data":{"id":"otjm","type":"providers"}},"media":{"data":{"id":"10.6084/m9.figshare.c.4234010","type":"media"}},"references":{"data":[]},"citations":{"data":[]},"parts":{"data":[]},"partOf":{"data":[]},"versions":{"data":[]},"versionOf":{"data":[]}}}}