{"data":{"id":"10.6084/m9.figshare.c.2114627","type":"dois","attributes":{"doi":"10.6084/m9.figshare.c.2114627","prefix":"10.6084","suffix":"m9.figshare.c.2114627","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Liu, Feng","givenName":"Feng","familyName":"Liu","affiliation":[],"nameIdentifiers":[]},{"name":"Pang, Shaojun","givenName":"Shaojun","familyName":"Pang","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Mitochondrial genome of \u003ci\u003eSargassum thunbergii\u003c/i\u003e: conservation and variability of mitogenomes within the subgenus \u003ci\u003eBactrophycus\u003c/i\u003e"}],"publisher":"Taylor \u0026 Francis","container":{},"publicationYear":2015,"subjects":[{"subject":"Genetics"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Evolutionary Biology"},{"subject":"Environmental Sciences not elsewhere classified"},{"subject":"Ecology"},{"subject":"Biological Sciences not elsewhere classified"},{"subject":"Infectious Diseases"},{"subject":"FOS: Health sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Computational Biology"}],"contributors":[],"dates":[{"date":"2015-12-05","dateType":"Created"},{"date":"2019-08-19","dateType":"Updated"},{"date":"2015","dateType":"Issued"}],"language":null,"types":{"ris":"GEN","bibtex":"misc","citeproc":"article","schemaOrg":"Collection","resourceType":"Collection","resourceTypeGeneral":"Collection"},"relatedIdentifiers":[],"relatedItems":[],"sizes":[],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"\u003ci\u003eSargassum thunbergii\u003c/i\u003e (Mertens ex Roth) Kuntze is a common brown seaweed in rocky intertidal zones along the northwestern Pacific coast. In the present study, we sequenced and annotated the complete mitochondrial genome of \u003ci\u003eS. thunbergii\u003c/i\u003e. The circular \u003ci\u003eS. thunbergii\u003c/i\u003e mitogenome is 34,748 bp in size and contains the same set of 65 genes as other mtDNAs in four \u003ci\u003eSargassum\u003c/i\u003e species. The genome organization including the gene order, overlapping regions between genes and the total length of inter-genic regions is highly similar to the other \u003ci\u003eBactrophycus\u003c/i\u003e species. The comparison by genome scale alignment displays only minor differences in gene lengths, but higher divergence in inter-genic spacer regions, especially the \u003ci\u003ecox3-atp6\u003c/i\u003e inter-genic spacer. Mitochondrial phylogenomics suggests that \u003ci\u003eS. thunbergii\u003c/i\u003e is tightly combined with \u003ci\u003eSargassum muticum\u003c/i\u003e and \u003ci\u003eSargassum hemiphyllum\u003c/i\u003e forming the sect. \u003ci\u003eTeretia\u003c/i\u003e clade with strong support values (NJ/ML, 100%). The present data illustrate that the complete mtDNAs could provide a more complete assessment of their phylogenetic relationships.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://tandf.figshare.com/collections/Mitochondrial_genome_of_i_Sargassum_thunbergii_i_conservation_and_variability_of_mitogenomes_within_the_subgenus_i_Bactrophycus_i_/2114627","contentUrl":null,"metadataVersion":3,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2015-12-05T18:30:50.000Z","registered":"2015-12-05T18:30:52.000Z","published":"2015","updated":"2024-03-21T09:27:46.000Z"},"relationships":{"client":{"data":{"id":"figshare.ars","type":"clients"}},"provider":{"data":{"id":"otjm","type":"providers"}},"media":{"data":{"id":"10.6084/m9.figshare.c.2114627","type":"media"}},"references":{"da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