{"data":{"id":"10.6084/m9.figshare.997784","type":"dois","attributes":{"doi":"10.6084/m9.figshare.997784","prefix":"10.6084","suffix":"m9.figshare.997784","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Ekramul Islam","affiliation":[],"nameIdentifiers":[]},{"name":"Dhiraj Paul","affiliation":[],"nameIdentifiers":[]},{"name":"Pinaki Sar","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Microbial Diversity in Uranium Deposits from Jaduguda and Bagjata Uranium Mines, India as Revealed by Clone Library and Denaturing Gradient Gel Electrophoresis Analyses"}],"publisher":"Taylor \u0026 Francis","container":{},"publicationYear":2014,"subjects":[{"subject":"Biological Sciences"},{"subject":"Ecology"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Biological sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Earth and Environmental Sciences"},{"subject":"Microbiology"}],"contributors":[],"dates":[{"date":"2014-04-14","dateType":"Created"},{"date":"2015-12-02","dateType":"Updated"},{"date":"2014","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[{"relationType":"IsSupplementTo","relatedIdentifier":"10.1080/01490451.2014.907375","relatedIdentifierType":"DOI"}],"relatedItems":[],"sizes":["3848704 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"Microbial communities within subsurface uranium (U) deposits were explored to understand the nature of community composition and their potential role in biogeochemical cycle and bioremediation. Geochemical analysis revealed that the U ores were mainly hosted on metamorphosed chlorite-biotite schists, containing varied organic carbon and elevated level of several heavy metals (U, Cu, Cr, Zn, etc.). Microbial diversity as explored by 16S rRNA gene clone library and DGGE analyses revealed predominance of \u003ci\u003eProteobacteria\u003c/i\u003e, \u003ci\u003eAcidobacteria\u003c/i\u003e, \u003ci\u003eBacteroidetes\u003c/i\u003e along with \u003ci\u003eFirmicutes\u003c/i\u003e and candidate division OP9 within the domain \u003ci\u003eBacteria\u003c/i\u003e and \u003ci\u003eEuryarchaeota\u003c/i\u003e within the domain \u003ci\u003eArchaea\u003c/i\u003e. Among the physiochemical parameters, level of organic carbon showed considerable impact on influencing community diversity and composition. Samples from Jaduguda with high organic carbon showed abundance of bacteria known for metabolizing different carbon compounds and affiliated to unclassified uncultured members of \u003ci\u003eChitnophagaceae\u003c/i\u003e (\u003ci\u003eBacteroidetes\u003c/i\u003e), Gp4 of \u003ci\u003eAcidobacteria\u003c/i\u003e and unclassified β-\u003ci\u003eProteobacteria\u003c/i\u003e and halophilic, nitrate-reducing γ-\u003ci\u003eProteobacteria\u003c/i\u003e. A relatively diverse assemblage of species capable of autotrophic/heterotrophic N\u003csub\u003e2\u003c/sub\u003e fixation, CH\u003csub\u003e4\u003c/sub\u003e utilization, H\u003csub\u003e2\u003c/sub\u003e(0)/Fe(II)/Mn(II)/S(0) oxidation, NO\u003csub\u003e3\u003c/sub\u003e/Fe(III) reduction, U and other metal precipitation/mineralization and affiliated to families \u003ci\u003eRhizobiaceae, Bradyrhizobiaceae, Caulobacteraceae\u003c/i\u003e, \u003ci\u003eComamonadaceae\u003c/i\u003e and genera \u003ci\u003eAcinetobacter, Marinobacter\u003c/i\u003e and \u003ci\u003eAlcanivorax\u003c/i\u003e constituted the Bagjata samples. Distribution and interrelations among abundance of various bacterial groups detected in other U mines/radioactive waste sites were compared with our data. Overall, the study reported distinct compositions of indigenous microbial communities among the samples from two mines and provided a better insight in geomicrobiology of U deposits.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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