{"data":{"id":"10.6084/m9.figshare.825441","type":"dois","attributes":{"doi":"10.6084/m9.figshare.825441","prefix":"10.6084","suffix":"m9.figshare.825441","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"C. Shao","affiliation":[],"nameIdentifiers":[]},{"name":"H. Wang","affiliation":[],"nameIdentifiers":[]},{"name":"Y. Meng","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Global survey on sequence characteristics of plant microRNA genes: \u003ci\u003eCis\u003c/i\u003e-regulatory SNPs in promoters and microRNA precursors"}],"publisher":"Taylor \u0026 Francis","container":{},"publicationYear":2013,"subjects":[{"subject":"Plant Biology"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Biological sciences","subjectScheme":"Fields of Science and Technology (FOS)"}],"contributors":[],"dates":[{"date":"2013-10-17","dateType":"Created"},{"date":"2013-10-21","dateType":"Updated"},{"date":"2013","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[{"relationType":"IsSupplementTo","relatedIdentifier":"10.1080/11263504.2012.713405","relatedIdentifierType":"DOI"}],"relatedItems":[],"sizes":["3951660 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"MicroRNAs (miRNAs) are tiny molecules with multiple essential roles in plant growth and development. So far, numerous miRNA families, both highly conserved and species-specific, have been identified and functionally characterized. However, we are still far from a thorough understanding of these molecules, including their sequence characteristics. In this bioinformatics study, \u003ci\u003ecis\u003c/i\u003e-acting regulatory elements located within plant miRNA promoters were predicted, and a comprehensive list of single nucleotide polymorphisms (SNPs) residing within these \u003ci\u003ecis\u003c/i\u003e-elements, designated as \u003ci\u003ecis\u003c/i\u003e-regulatory SNPs, was identified. These SNPs potentially contribute to the distinct expression patterns of miRNA genes in various Arabidopsis (\u003ci\u003eArabidopsis thaliana\u003c/i\u003e) or rice (\u003ci\u003eOryza sativa\u003c/i\u003e) subspecies. Additionally, sequence conservation analysis was carried out for all the currently miRBase-registered pre-miRNAs (precursor miRNAs) belonging to numerous plant species. Together, these analyses provide a basis to gain deeper insights into the biological role of miRNA sequence characteristics.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"PD94bWwgdmVyc2lvbj0iMS4wIiBlbmNvZGluZz0iVVRGLTgiPz4KPHJlc291cmNlIHhtbG5zPSJodHRwOi8vZGF0YWNpdGUub3JnL3NjaGVtYS9rZXJuZWwtNCIgeG1sbnM6eHNpPSJodHRwOi8vd3d3LnczLm9yZy8yMDAxL1hNTFNjaGVtYS1pbnN0YW5jZSIgeHNpOnNjaGVtYUxvY2F0aW9uPSJodHRwOi8vZGF0YWNpdGUub3JnL3NjaGVtYS9rZXJuZWwtNCBodHRwOi8vc2NoZW1hLmRhdGFjaXRlLm9yZy9tZXRhL2tlcm5lbC00LjEvbWV0YWRhdGEueHNkIj4KICA8aWRlbnRpZmllciBpZGVudGlmaWVyVHlwZT0iRE9JIj4xMC42MDg0L005LkZJR1NIQVJFLjgyNTQ0MTwvaWRlbnRpZmllcj4KICA8Y3JlYXRvcnM+CiAgICA8Y3JlYXRvcj4KICAgICAgPGNyZWF0b3JOYW1lPkMuIFNoYW88L2NyZWF0b3JOYW1lPgogICAgPC9jcmVhdG9yPgogICAgPGNyZWF0b3I+CiAgICAgIDxjcmVhdG9yTmFtZT5ILiBXYW5nPC9jcmVhdG9yTmFtZT4KICAgIDwvY3JlYXRvcj4KICAgIDxjcmVhdG9yPgogICAgICA8Y3JlYXRvck5hbWU+WS4gTWVuZzwvY3JlYXRvck5hbWU+CiAgICA8L2NyZWF0b3I+CiAgPC9jcmVhdG9ycz4KICA8dGl0bGVzPgogICAgPHRpdGxlPkdsb2JhbCBzdXJ2ZXkgb24gc2VxdWVuY2UgY2hhcmFjdGVyaXN0aWNzIG9mIHBsYW50IG1pY3JvUk5BIGdlbmVzOiAmbHQ7aSZndDtDaXMmbHQ7L2kmZ3Q7LXJlZ3VsYXRvcnkgU05QcyBpbiBwcm9tb3RlcnMgYW5kIG1pY3JvUk5BIHByZWN1cnNvcnM8L3RpdGxlPgogIDwvdGl0bGVzPgogIDxkZXNjcmlwdGlvbnM+CiAgICA8ZGVzY3JpcHRpb24gZGVzY3JpcHRpb25UeXBlPSJBYnN0cmFjdCI+Jmx0O2RpdiZndDsmbHQ7cCZndDtNaWNyb1JOQXMgKG1pUk5BcykgYXJlIHRpbnkgbW9sZWN1bGVzIHdpdGggbXVsdGlwbGUgZXNzZW50aWFsIHJvbGVzIGluIHBsYW50IGdyb3d0aCBhbmQgZGV2ZWxvcG1lbnQuIFNvIGZhciwgbnVtZXJvdXMgbWlSTkEgZmFtaWxpZXMsIGJvdGggaGlnaGx5IGNvbnNlcnZlZCBhbmQgc3BlY2llcy1zcGVjaWZpYywgaGF2ZSBiZWVuIGlkZW50aWZpZWQgYW5kIGZ1bmN0aW9uYWxseSBjaGFyYWN0ZXJpemVkLiBIb3dldmVyLCB3ZSBhcmUgc3RpbGwgZmFyIGZyb20gYSB0aG9yb3VnaCB1bmRlcnN0YW5kaW5nIG9mIHRoZXNlIG1vbGVjdWxlcywgaW5jbHVkaW5nIHRoZWlyIHNlcXVlbmNlIGNoYXJhY3RlcmlzdGljcy4gSW4gdGhpcyBiaW9pbmZvcm1hdGljcyBzdHVkeSwgJmx0O2kmZ3Q7Y2lzJmx0Oy9pJmd0Oy1hY3RpbmcgcmVndWxhdG9yeSBlbGVtZW50cyBsb2NhdGVkIHdpdGhpbiBwbGFudCBtaVJOQSBwcm9tb3RlcnMgd2VyZSBwcmVkaWN0ZWQsIGFuZCBhIGNvbXByZWhlbnNpdmUgbGlzdCBvZiBzaW5nbGUgbnVjbGVvdGlkZSBwb2x5bW9ycGhpc21zIChTTlBzKSByZXNpZGluZyB3aXRoaW4gdGhlc2UgJmx0O2kmZ3Q7Y2lzJmx0Oy9pJmd0Oy1lbGVtZW50cywgZGVzaWduYXRlZCBhcyAmbHQ7aSZndDtjaXMmbHQ7L2kmZ3Q7LXJlZ3VsYXRvcnkgU05Qcywgd2FzIGlkZW50aWZpZWQuIFRoZXNlIFNOUHMgcG90ZW50aWFsbHkgY29udHJpYnV0ZSB0byB0aGUgZGlzdGluY3QgZXhwcmVzc2lvbiBwYXR0ZXJucyBvZiBtaVJOQSBnZW5lcyBpbiB2YXJpb3VzIEFyYWJpZG9wc2lzICgmbHQ7aSZndDtBcmFiaWRvcHNpcyB0aGFsaWFuYSZsdDsvaSZndDspIG9yIHJpY2UgKCZsdDtpJmd0O09yeXphIHNhdGl2YSZsdDsvaSZndDspIHN1YnNwZWNpZXMuIEFkZGl0aW9uYWxseSwgc2VxdWVuY2UgY29uc2VydmF0aW9uIGFuYWx5c2lzIHdhcyBjYXJyaWVkIG91dCBmb3IgYWxsIHRoZSBjdXJyZW50bHkgbWlSQmFzZS1yZWdpc3RlcmVkIHByZS1taVJOQXMgKHByZWN1cnNvciBtaVJOQXMpIGJlbG9uZ2luZyB0byBudW1lcm91cyBwbGFudCBzcGVjaWVzLiBUb2dldGhlciwgdGhlc2UgYW5hbHlzZXMgcHJvdmlkZSBhIGJhc2lzIHRvIGdhaW4gZGVlcGVyIGluc2lnaHRzIGludG8gdGhlIGJpb2xvZ2ljYWwgcm9sZSBvZiBtaVJOQSBzZXF1ZW5jZSBjaGFyYWN0ZXJpc3RpY3MuJmx0Oy9wJmd0OyZsdDsvZGl2Jmd0OzwvZGVzY3JpcHRpb24+CiAgPC9kZXNjcmlwdGlvbnM+CiAgPHN1YmplY3RzPgogICAgPHN1YmplY3Q+UGxhbnQgQmlvbG9neTwvc3ViamVjdD4KICA8L3N1YmplY3RzPgogIDxwdWJsaXNoZXI+VGF5bG9yICZhbXA7IEZyYW5jaXM8L3B1Ymxpc2hlcj4KICA8cHVibGljYXRpb25ZZWFyPjIwMTM8L3B1YmxpY2F0aW9uWWVhcj4KICA8ZGF0ZXM+CiAgICA8ZGF0ZSBkYXRlVHlwZT0iQ3JlYXRlZCI+MjAxMy0xMC0xNzwvZGF0ZT4KICAgIDxkYXRlIGRhdGVUeXBlPSJVcGRhdGVkIj4yMDEzLTEwLTIxPC9kYXRlPgogIDwvZGF0ZXM+CiAgPHJlc291cmNlVHlwZSByZXNvdXJjZVR5cGVHZW5lcmFsPSJEYXRhc2V0Ij5EYXRhc2V0PC9yZXNvdXJjZVR5cGU+CiAgPHNpemVzPgogICAgPHNpemU+Mzk1MTY2MCBCeXRlczwvc2l6ZT4KICA8L3NpemVzPgogIDxyZWxhdGVkSWRlbnRpZmllcnM+CiAgICA8cmVsYXRlZElkZW50aWZpZXIgcmVsYXRlZElkZW50aWZpZXJUeXBlPSJET0kiIHJlbGF0aW9uVHlwZT0iSXNTdXBwbGVtZW50VG8iPjEwLjEwODAvMTEyNjM1MDQuMjAxMi43MTM0MDU8L3JlbGF0ZWRJZGVudGlmaWVyPgogIDwvcmVsYXRlZElkZW50aWZpZXJzPgogIDxyaWdodHNMaXN0PgogICAgPHJpZ2h0cyByaWdodHNVUkk9Imh0dHBzOi8vY3JlYXRpdmVjb21tb25zLm9yZy9saWNlbnNlcy9ieS80LjAvIj5DQyBCWSA0LjA8L3JpZ2h0cz4KICA8L3JpZ2h0c0xpc3Q+CjwvcmVzb3VyY2U+","url":"https://tandf.figshare.com/articles/dataset/Global_survey_on_sequence_characteristics_of_plant_microRNA_genes_i_Cis_i_regulatory_SNPs_in_promoters_and_microRNA_precursors/825441","contentUrl":null,"metadataVersion":3,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2013-10-18T10:29:34.000Z","registered":"2013-10-18T10:29:35.000Z","published":"2013","updated":"2020-09-05T01:17:21.000Z"},"relationships":{"client":{"data":{"id":"figshare.ars","type":"clients"}},"provider":{"data":{"id":"otjm","type":"providers"}},"media":{"data":{"id":"10.6084/m9.figshare.825441","type":"media"}},"references":{"data":[]},"citations":{"data":[]},"parts":{"data":[]},"partOf":{"data":[]},"versions":{"data":[]},"versionOf":{"data":[]}}}}