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Medical Proteomics)","subjectScheme":"FOR"},{"subject":"110312 Nephrology and Urology","subjectScheme":"FOR"}],"contributors":[],"dates":[{"date":"2018-12-13","dateType":"Created"},{"date":"2019-02-24","dateType":"Updated"},{"date":"2019","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[],"relatedItems":[],"sizes":["545798 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"Whole transcriptome analysis of TGF-beta1 treated fibroblasts\u003cbr\u003eMethods: RNA was purified using a miRCURY RNA isolation kit (#300110, Exiqon A/S, Vedbaek, Denmark) with an Agilent 2100 Bioanalyzer (Agilant, Santa Clara, CA, USA) used to check RNA integrity. The Illumina TrueSeq mRNA sample preparation kit (Illumina, San Diego, CA, USA) was used to prepare RNA libraries for sequencing on the Illumina HiSEq 2000. Reads were aligned using TopHat2 with the rn6 build of the rat genome. Transcript assembly and differential expression (DE) was by Cufflinks with Refseq mRNAs to guide assembly. Statistically different changes were identified by ANOVA using Partek Flow (Partek, Singapore), as previously described in https://doi.org/10.1016/j.biocel.2017.09.009.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://figshare.com/articles/R1_Supplemental_dataset_xlsx/7464818","contentUrl":null,"metadataVersion":2,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2018-12-13T23:18:21.000Z","registered":"2018-12-13T23:18:22.000Z","published":"2019","updated":"2020-08-28T00:06:53.000Z"},"relationships":{"client":{"data":{"id":"figshare.ars","type":"clients"}},"provider":{"data":{"id":"otjm","type":"providers"}},"media":{"data":{"id":"10.6084/m9.figshare.7464818","type":"media"}},"references":{"data":[]},"citations":{"data":[]},"parts":{"data":[]},"partOf":{"data":[]},"versions":{"data":[]},"versionOf":{"data":[]}}}}