{"data":{"id":"10.6084/m9.figshare.660847","type":"dois","attributes":{"doi":"10.6084/m9.figshare.660847","prefix":"10.6084","suffix":"m9.figshare.660847","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Boettiger, Carl","nameType":"Personal","givenName":"Carl","familyName":"Boettiger","affiliation":[],"nameIdentifiers":[{"schemeUri":"https://orcid.org","nameIdentifier":"https://orcid.org/0000-0002-1642-628X","nameIdentifierScheme":"ORCID"}]},{"name":"Lang, Duncan Temple","nameType":"Personal","givenName":"Duncan Temple","familyName":"Lang","affiliation":[],"nameIdentifiers":[]},{"name":"Wainwright, Peter","nameType":"Personal","givenName":"Peter","familyName":"Wainwright","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"rfishbase compendium: Publication, R package, version history"}],"publisher":"figshare","container":{},"publicationYear":2013,"subjects":[{"subject":"Environmental Science"},{"subject":"60102 Bioinformatics","subjectScheme":"FOR"},{"subject":"FOS: Computer and information sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Computer and information sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Applied Computer Science"}],"contributors":[],"dates":[{"date":"2013-03-27","dateType":"Created"},{"date":"2013-04-09","dateType":"Updated"},{"date":"2013","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[],"relatedItems":[],"sizes":["35123200 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"rfishbase\u003cbr\u003e========= _Accessing data from FishBase using R_ 'rfishbase' is a package for interfacing with the [fishbase.org](http://fishbase.org) database. It provides code to download and parse a local copy of fishbase, which can be used for rapid access for a variety of analysis functions. - [Published copy in Journal of Fish Biology](http://dx.doi.org/10.1111/j.1095-8649.2012.03464.x) - [Development version source code on github](https://github.com/ropensci/rfishbase)\u003cbr\u003e- [HTML package documentation](http://ropensci.github.com/rfishbase/)\u003cbr\u003e- [Report issues, bugs or feature requests](https://github.com/ropensci/rfishbase/issues) Installation\u003cbr\u003e------------ 'rfishbase' is available [on CRAN](http://cran.r-project.org/web/packages/rfishbase/) and can be installed through the R package manager (see 'install.packages'). The latest (development) version is hosted here on github, and can be installed using the [devtools](https://github.com/hadley/devtools) package: '''r\u003cbr\u003elibrary(devtools)\u003cbr\u003einstall_github(\"rfishbase\", \"ropensci\")\u003cbr\u003e''' Getting started\u003cbr\u003e--------------- - Read our [tutorial](https://github.com/ropensci/rfishbase/blob/master/inst/doc/rfishbase/rfishbase_github.md)\u003cbr\u003e- Browse the examples in the [documentation](http://ropensci.github.com/rfishbase/) 'rfishbase' is developed by [Carl Boettiger](https://github.com/cboettig) in collaboration with [Duncan Temple Lang](https://github.com/duncantl) and Peter Wainwright, and is part of the [rOpenSci project](http://github.com/ropensci). This software, examples, and documentation are freely provided under the [CC0 license](http://creativecommons.org/publicdomain/zero/1.0/). A [preprint](https://github.com/ropensci/rfishbase/blob/master/inst/doc/rfishbase/rfishbase_github.md) of our manuscript introducing the package can be found in the [inst/doc](https://github.com/ropensci/rfishbase/tree/master/inst/doc) directory. References\u003cbr\u003e---------- Froese, R. and D. Pauly. Editors. 2011. FishBase.\u003cbr\u003eWorld Wide Web electronic publication.\u003cbr\u003ewww.fishbase.org, version (08/2011).","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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