{"data":{"id":"10.6084/m9.figshare.1439710","type":"dois","attributes":{"doi":"10.6084/m9.figshare.1439710","prefix":"10.6084","suffix":"m9.figshare.1439710","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"O'Brien, Heath","nameType":"Personal","givenName":"Heath","familyName":"O'Brien","affiliation":[],"nameIdentifiers":[{"schemeUri":"https://orcid.org","nameIdentifier":"https://orcid.org/0000-0003-2309-8736","nameIdentifierScheme":"ORCID"}]},{"name":"Dentinger, Bryn","nameType":"Personal","givenName":"Bryn","familyName":"Dentinger","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Agaricales Genomics"}],"publisher":"figshare","container":{},"publicationYear":2015,"subjects":[{"subject":"60102 Bioinformatics","subjectScheme":"FOR"},{"subject":"FOS: Computer and information sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Computer and information sciences","subjectScheme":"Fields of Science and Technology (FOS)"}],"contributors":[],"dates":[{"date":"2015-06-08","dateType":"Created"},{"date":"2015-06-10","dateType":"Updated"},{"date":"2015","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[],"relatedItems":[],"sizes":["8046641 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"Datasets created for Dentinger et al. 2015. Tales from the crypt: genome mining from fungarium specimens improves resolution of the mushroom tree of life. Biological Journal of the Linnean Society. \u003cstrong\u003eContents\u003c/strong\u003e Untrimmed Single-Gene Alignments: Raw untrimmed amino acid alignments of 210 single-copy genes from 35 Agaricales taxa, plus 5 five outgroups (relaxed Phylip format). Trimmed Single-Gene Alignments: Trimmed amino acid alignments of 208 single-copy genes from 35 Agaricales taxa, plus 5 five outgroups (relaxed Phylip format). Single-Gene Analyses: Best tree from RaxML analysis single-gene amino acid sequence alignments for 208 single-copy genes from 35 Agaricales taxa plus four outgroups (Newick format). Concatinated Alignment: Final trimmed, concatinated amino acid alignment of 208 single-copy genes from 35 Agaricales taxa, plus 5 five outgroups (relaxed Phylip format) Unpartitioned Analysis: Best tree from unpartitioned RaxML analysis of concatinated alignment of amino acid sequences for 208 single-copy genes from 35 Agaricales taxa plus four outgroups (Newick format). Partition Info for Concatinated Alignment: Partition information for concatinated amino acid alignment of 208 single-copy genes from 35 Agaricales taxa, plus four outgroups. Gene names are based on Coprinopsis cinerea locus IDs Partitioned Analysis: Best tree from partitioned RaxML analysis of concatinated alignment of amino acid sequences for 208 single-copy genes from 35 Agaricales taxa plus four outgroups (Newick 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