{"data":{"id":"10.6084/m9.figshare.1305733","type":"dois","attributes":{"doi":"10.6084/m9.figshare.1305733","prefix":"10.6084","suffix":"m9.figshare.1305733","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"S. Moja","affiliation":[],"nameIdentifiers":[]},{"name":"Y. Guitton","affiliation":[],"nameIdentifiers":[]},{"name":"F. Nicolè","affiliation":[],"nameIdentifiers":[]},{"name":"L. Legendre","affiliation":[],"nameIdentifiers":[]},{"name":"B. Pasquier","affiliation":[],"nameIdentifiers":[]},{"name":"T. Upson","affiliation":[],"nameIdentifiers":[]},{"name":"F. Jullien","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Genome size and plastid trnK-matK markers give new insights into the evolutionary history of the genus \u003ci\u003eLavandula\u003c/i\u003e L."}],"publisher":"Taylor \u0026 Francis","container":{},"publicationYear":2015,"subjects":[{"subject":"Microbiology"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Biological sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Genetics"},{"subject":"Evolutionary Biology"},{"subject":"59999 Environmental Sciences not elsewhere classified","subjectScheme":"FOR"},{"subject":"FOS: Earth and related environmental sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Earth and related environmental sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Ecology"},{"subject":"69999 Biological Sciences not elsewhere classified","subjectScheme":"FOR"},{"subject":"110309 Infectious Diseases","subjectScheme":"FOR"},{"subject":"FOS: Health sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Health sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Plant Biology"},{"subject":"60506 Virology","subjectScheme":"FOR"}],"contributors":[],"dates":[{"date":"2015-02-11","dateType":"Created"},{"date":"2016-11-07","dateType":"Updated"},{"date":"2015","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[{"relationType":"IsSupplementTo","relatedIdentifier":"10.1080/11263504.2015.1014006","relatedIdentifierType":"DOI"}],"relatedItems":[],"sizes":["757799 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"The genus \u003ci\u003eLavandula\u003c/i\u003e L. consists of 39 species distributed from the North Atlantic Islands, across the Mediterranean Basin to India. We analysed 36 taxa of the genus \u003ci\u003eLavandula\u003c/i\u003e representing two of the three subgenera and six of the eight sections according to the most recent classification (Upson \u0026amp; Andrews 2004). We achieved a phylogenetic reconstruction from partial sequences from plastid trnK and matK genes; the genome size was estimated by flow cytometer measurements. The primary aim was to track phylogenetic patterns through the maternal inherited marker at the sectional level and identify possible genome duplications. The cpDNA tree shows the phylogenetic relationships between subgenus, sections and also elucidates for the first time the relationships between the endemic species of Macaronesia, Morocco and Arabia. The ancestral split between the two subgenera could be explained by dispersal followed by an early vicariance event. The \u003ci\u003eC\u003c/i\u003e-value shows genome up-sizing within several phylogenetic clades and geographical areas. An ancestral genome-up sizing is characterized at the node of section \u003ci\u003eDentatae\u003c/i\u003e and \u003ci\u003eLavandula\u003c/i\u003e. The cpDNA tree suggests that the taxa \u003ci\u003eL. angustifolia\u003c/i\u003e subsp. \u003ci\u003epyrenaica\u003c/i\u003e (DC.) Guinea and \u003ci\u003eL. stoechas\u003c/i\u003e subsp. \u003ci\u003eluiseiri\u003c/i\u003e are best treated as a distinct species.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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