{"data":{"id":"10.6084/m9.figshare.11864571.v2","type":"dois","attributes":{"doi":"10.6084/m9.figshare.11864571.v2","prefix":"10.6084","suffix":"m9.figshare.11864571.v2","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Holsman, Kirstin","nameType":"Personal","givenName":"Kirstin","familyName":"Holsman","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"aclim_00_JunV2_2019_2.zip"}],"publisher":"figshare","container":{},"publicationYear":2020,"subjects":[{"subject":"60205 Marine and Estuarine Ecology (incl. Marine Ichthyology)","subjectScheme":"FOR"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Biological sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"40104 Climate Change Processes","subjectScheme":"FOR"},{"subject":"FOS: Earth and related environmental sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Earth and related environmental sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"70403 Fisheries Management","subjectScheme":"FOR"},{"subject":"FOS: Agriculture, forestry and fisheries","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Agriculture, forestry and fisheries","subjectScheme":"Fields of Science and Technology (FOS)"}],"contributors":[],"dates":[{"date":"2020-02-18","dateType":"Created"},{"date":"2020-02-18","dateType":"Updated"},{"date":"2020","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[{"relationType":"IsPreviousVersionOf","relatedIdentifier":"10.6084/m9.figshare.11864571","relatedIdentifierType":"DOI"}],"relatedItems":[],"sizes":["0 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"Multispecies Assessment model runs for the Eastern Bering Sea (run with trophic interactions). More information available at:www.fisheries.noaa.gov/resource/data/2018-climate-enhanced-multi-species-stock-assessment-walleye-pollock-pacific-cod-and\u003cbr\u003e\u003cbr\u003eThree files included to support Rcode forHolsman et al. Ecosystem-based fisheries management forestalls climate-driven collapse. Nature Climate Change (in review).\u003cbr\u003eCode available at: https://github.com/kholsman/EBM_Holsman_NatComm\u003cbr\u003e\u003cbr\u003e## Input data:If running plotting code below (recommended) you will need to download the intermediate data \"EBM_ceattlenew.Rdata\" from figshare and place it in the main directory: \"EBM_Holsman_NatComm/EBM_ceattlenew.Rdata\".\u003cbr\u003eIf re-running the intermediate data analysis (not recommended) the following files will need to be downloaded unzipped and placed in the asssesment_files folder:EBM_Holsman_NatComm/data/runs/[ files]\u003cbr\u003e## Intermediate data:Intermediate data can be found in the main EBM_Holsman_NatComm in the form of .Rdata files but can be recreated from the ADMB model using the EBM_Holsman_NatComm/assessment_scripts/README_EBM_Holsman_Analysis.pdf (not recommended; see below).\u003cbr\u003e## Figures and tables:Final figures and tables (including illustrator files that were used to add fish icons) can be found in the **Figures** folder.\u003cbr\u003e\u003cbr\u003eThis is the main script for running analysis and plotting results and requires R version 3.5.3 (available at https://cran.r-project.org/bin/macosx/el-capitan/base/). To update the analysis using .Rdata outputs run the R() code below as is currently configured. If you want to update the intermediate data, set \"readdat\" to TRUE in line 80 below. The CEATTLE stock assessment is also included but requires AD Model builder (http://www.admb-project.org). To run the assessment scripts (not recommended or tested outside of macOSX) see \"README_EBM_Holsman_Analysis.pdf\".\u003cbr\u003e","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://figshare.com/articles/aclim_00_JunV2_2019_2_zipEBM_Holsman_Bering_Sea_climate_change_files/11864571/2","contentUrl":null,"metadataVersion":3,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":1,"viewsOverTime":[{"yearMonth":"2026-08","total":1}],"downloadCount":0,"downloadsOverTime":[{"yearMonth":"2026-08","total":0}],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2020-02-18T08:24:53.000Z","registered":"2020-02-18T08:24:54.000Z","published":"2020","updated":"2020-08-25T23:18:12.000Z"},"relationships":{"client":{"data":{"id":"figshare.ars","type":"clients"}},"provider":{"data":{"id":"otjm","type":"providers"}},"media":{"data":{"id":"10.6084/m9.figshare.11864571.v2","type":"media"}},"references":{"data":[]},"citations":{"data":[]},"parts":{"data":[]},"partOf":{"data":[]},"versions":{"data":[]},"versionOf":{"data":[]}}}}