{"data":{"id":"10.6084/m9.figshare.1177954","type":"dois","attributes":{"doi":"10.6084/m9.figshare.1177954","prefix":"10.6084","suffix":"m9.figshare.1177954","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Tang, Cuong","nameType":"Personal","givenName":"Cuong","familyName":"Tang","affiliation":[],"nameIdentifiers":[]},{"name":"Leasi, Francesca","nameType":"Personal","givenName":"Francesca","familyName":"Leasi","affiliation":[],"nameIdentifiers":[]},{"name":"Obertegger, Ulrike","nameType":"Personal","givenName":"Ulrike","familyName":"Obertegger","affiliation":[],"nameIdentifiers":[]},{"name":"Kieneke, Alexander","nameType":"Personal","givenName":"Alexander","familyName":"Kieneke","affiliation":[],"nameIdentifiers":[]},{"name":"Barraclough, Timothy G.","nameType":"Personal","givenName":"Timothy G.","familyName":"Barraclough","affiliation":[],"nameIdentifiers":[]},{"name":"Fontaneto, Diego","nameType":"Personal","givenName":"Diego","familyName":"Fontaneto","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Alignments and Trees for Chapter 2"}],"publisher":"figshare","container":{},"publicationYear":2014,"subjects":[{"subject":"Molecular Biology"},{"subject":"60102 Bioinformatics","subjectScheme":"FOR"},{"subject":"FOS: Computer and information sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Computer and information sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Ecology"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Biological sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Zoology"},{"subject":"Evolutionary Biology"}],"contributors":[],"dates":[{"date":"2014-09-23","dateType":"Created"},{"date":"2015-12-02","dateType":"Updated"},{"date":"2014","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[],"relatedItems":[],"sizes":["1888835 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"Data generated and used for species delimitation for the article: Tang, C. Q., Leasi, F., Obertegger, U., Kieneke, A., Barraclough, T. G., \u0026amp; Fontaneto, D. (2012). The widely used small subunit 18S rDNA molecule greatly underestimates true diversity in biodiversity surveys of the meiofauna. Proceedings of the National Academy of Sciences of the United States of America, 109, 16208–16212. Each dataset (of which there 55) comprises sequences either downloaded from GenBank or sequenced by the co-authors.\u003cbr\u003eAlignments made with MAFFT within Geneious.\u003cbr\u003eThese alignments were collapsed into haplotype alignments.\u003cbr\u003eUltrametric trees were made from these using either BEAST or RaxML with r8s.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://figshare.com/articles/dataset/Alignments_and_Trees_for_doi_10_1073_pnas_1209160109/1177954","contentUrl":null,"metadataVersion":1,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2014-09-23T13:03:42.000Z","registered":"2014-09-23T13:03:43.000Z","published":"2014","updated":"2020-09-04T21:22:25.000Z"},"relationships":{"client":{"data":{"id":"figshare.ars","type":"clients"}},"provider":{"data":{"id":"otjm","type":"providers"}},"media":{"data":{"id":"10.6084/m9.figshare.1177954","type":"media"}},"references":{"data":[]},"citations":{"data":[]},"parts":{"data":[]},"partOf":{"data":[]},"versions":{"data":[]},"versionOf":{"data":[]}}}}