{"data":{"id":"10.6084/m9.figshare.11745495","type":"dois","attributes":{"doi":"10.6084/m9.figshare.11745495","prefix":"10.6084","suffix":"m9.figshare.11745495","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Danchin, Etienne","nameType":"Personal","givenName":"Etienne","familyName":"Danchin","affiliation":[],"nameIdentifiers":[{"schemeUri":"https://orcid.org","nameIdentifier":"https://orcid.org/0000-0003-4146-5608","nameIdentifierScheme":"ORCID"}]},{"name":"Abdelnaser Elashry","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"Functional annotation of predicted proteins in M. enterolobii (genome V1, INRA/JKI)"}],"publisher":"figshare","container":{},"publicationYear":2020,"subjects":[{"subject":"70308 Crop and Pasture Protection (Pests, Diseases and Weeds)","subjectScheme":"FOR"},{"subject":"FOS: Agriculture, forestry and fisheries","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Agriculture, forestry and fisheries","subjectScheme":"Fields of Science and Technology (FOS)"}],"contributors":[],"dates":[{"date":"2020-01-28","dateType":"Created"},{"date":"2020-02-07","dateType":"Updated"},{"date":"2020","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[],"relatedItems":[],"sizes":["7614422 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"Excel file summarizing the functional annotation of predicted protein-coding genes in M. enterolobii.We used PfamScan on the whole set of M. enterolobii proteins against the Pfam-A v32 library of HMM profiles to identify conserved protein domains. We used the Pfam annotation as well as the set of predicted proteins as an input to BLAST2GO pro v.1.12.11 to assign standard and ‘slim’ gene ontology terms according to the presence of Pfam domains, to BLASTp homology searches against the NCBI’s nr database and to Interproscan annotation performed internally in BLAST2GO.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://figshare.com/articles/Functional_annotation_of_predicted_proteins_in_M_enterolobii_genome_V1_INRA_JKI_/11745495","contentUrl":null,"metadataVersion":2,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2020-02-07T13:36:58.000Z","registered":"2020-02-07T13:36:58.000Z","published":"2020","updated":"2020-08-26T01:44:14.000Z"},"relationships":{"client":{"data":{"id":"figshare.ars","type":"clients"}},"provider":{"data":{"id":"otjm","type":"providers"}},"media":{"data":{"id":"10.6084/m9.figshare.11745495","type":"media"}},"references":{"data":[]},"citations":{"data":[]},"parts":{"data":[]},"partOf":{"data":[]},"versions":{"data":[]},"versionOf":{"data":[]}}}}