{"data":{"id":"10.6084/m9.figshare.1060465","type":"dois","attributes":{"doi":"10.6084/m9.figshare.1060465","prefix":"10.6084","suffix":"m9.figshare.1060465","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Olson, Claire","nameType":"Personal","givenName":"Claire","familyName":"Olson","affiliation":[],"nameIdentifiers":[]},{"name":"Roberts, Steven","nameType":"Personal","givenName":"Steven","familyName":"Roberts","affiliation":[],"nameIdentifiers":[{"schemeUri":"https://orcid.org","nameIdentifier":"https://orcid.org/0000-0001-8302-1138","nameIdentifierScheme":"ORCID"}]}],"titles":[{"title":"Crassostrea gigas high-throughput bisulfite sequencing (larvae and sperm tissues)"}],"publisher":"figshare","container":{},"publicationYear":2014,"subjects":[{"subject":"60102 Bioinformatics","subjectScheme":"FOR"},{"subject":"FOS: Computer and information sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Computer and information sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Marine Biology"},{"subject":"Developmental Biology"},{"subject":"Physiology"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Biological sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Molecular Biology"},{"subject":"Genetics"}],"contributors":[],"dates":[{"date":"2014-06-18","dateType":"Created"},{"date":"2014-06-18","dateType":"Updated"},{"date":"2014","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[],"relatedItems":[],"sizes":["60907120 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"This fileset contains genomic feature tracks from high-throughput bisulfite sequencing for Pacific oyster (Crassostrea gigas) spermatozoa and larvae samples. Samples were taken from two males (Male 1 and Male 3) and larvae taken from these males at Day 3 (D3) and Day 5 (D5) post-fertilization. Feature tracks were developed to be viewed with Integrative Genomics Viewer (http://www.broadinstitute.org/igv/) in conjunction with the C. gigas genome (Ensembl). File descriptions:\u003cbr\u003e\u003cem\u003emethratio_out_CG5x_IGV_M1.igv\u003c/em\u003e - Male 1 location and proportion of methylation for all analyzed CpG dinucleotides with greater than 5x coverage. \u003cem\u003emethratio_out_CG5x_IGV_M3.igv\u003c/em\u003e - Male 3 location and proportion of methylation for all analyzed CpG dinucleotides with greater than 5x coverage. \u003cem\u003emethratio_out_CG5x_IGV_T1D3.igv\u003c/em\u003e - Larvae from male 1 day 3 post-fertilization location and proportion of methylation for all analyzed CpG dinucleotides with greater than 5x coverage. \u003cem\u003emethratio_out_CG5x_IGV_T1D5.igv \u003c/em\u003e- Larvae from male 1 day 5 post-fertilization location and proportion of methylation for all analyzed CpG dinucleotides with greater than 5x coverage. \u003cem\u003emethratio_out_CG5x_IGV_T3D3.igv\u003c/em\u003e - Larvae from male 3 day 3 post-fertilization location and proportion of methylation for all analyzed CpG dinucleotides with greater than 5x coverage. \u003cem\u003emethratio_out_CG5x_IGV_T3D5.igv\u003c/em\u003e - Larvae from male 3 day 5 post-fertilization location and proportion of methylation for all analyzed CpG dinucleotides with greater than 5x coverage. \u003cem\u003eLarvaeSperm_igv.xml\u003c/em\u003e - A session file, which loads sample methylation tracks and location of C.gigas genome features.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://figshare.com/articles/dataset/Crassostrea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