{"data":{"id":"10.6084/m9.figshare.1037545","type":"dois","attributes":{"doi":"10.6084/m9.figshare.1037545","prefix":"10.6084","suffix":"m9.figshare.1037545","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Bulla, Martin","nameType":"Personal","givenName":"Martin","familyName":"Bulla","affiliation":[],"nameIdentifiers":[]}],"titles":[{"title":"R-SCRIPT and EXAMPLE DATA to extract incubation from temperature measurements"}],"publisher":"figshare","container":{},"publicationYear":2014,"subjects":[{"subject":"Physiology"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Biological sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Zoology"},{"subject":"Evolutionary Biology"}],"contributors":[],"dates":[{"date":"2014-05-27","dateType":"Created"},{"date":"2014-05-27","dateType":"Updated"},{"date":"2014","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[],"relatedItems":[],"sizes":["17935513 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"R-SCRIPT and EXAMPLE DATA to extract incubation from nest temperature measurements as described in “Biparental incubation patterns in a high Arctic-breeding shorebird: how do pairs divide their duties?”\u003cbr\u003eby M. Bulla, M. Valcu, A. L. Rutten, and B. Kempenaers\u003cbr\u003epublished in Behavioral Ecology, doi:10.1093/beheco/art098. --------------------------------------------------------------------------------------------------------------------------------------- The R-script\u003cbr\u003e- is optimized for data sets with per 5 seconds temperature readings (example data: 5s.txt) as well as for data sets with per 2 minutes temperature readings (artificially spread to each 5 second; example data: 2m.txt)\u003cbr\u003e- runs with R (Version 2.15.13) and package zoo (Version 1.7-10) Data collection and how the individual variables and threshold values were derived is described in the paper and its supplementaries. Example data sets are available as 2 text files (values are separated by semi-colon ).\u003cbr\u003eBoth data set contain of following variables: nest (unique identity of the nest), datetime_ (date and time of the sampled datapoint), t_nest (nest incubation temperature in °C), t_ambient (tundra temperature next to the nest in °C). --------------------------------------------------------------------------------------------------------------------------------------- WHEN USING THIS R-SCRIPT OR DATA, PLEACE CITE THE ORIGINAL PUBLICATION: Bulla M, Valcu M, Rutten AL, Kempenaers B (2014) Biparental incubation patterns in a high Arctic-breeding shorebird: how do pairs divide their duties? Behavioral Ecology 25(1): 152-164. doi:10.1093/beheco/art098 ADDITIONALLY, PLEASE CITE THE FIGSHARE.COM R-SCRIPT and DATA: Bulla M.R-SCRIPT and EXAMPLE DATA to extract incubation from temperature measurements. figshare.com\u003cbr\u003eAvailable at: http://figshare.com/articles/R_SCRIPT_and_EXAMPLE_DATA_to_extract_incubation_from_temperature_measurements/1037545","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://figshare.com/articles/dataset/R_SCRIPT_and_EXAMPLE_DATA_to_extract_incubation_from_temperature_measurements/1037545","contentUrl":null,"metadataVersion":1,"schemaVersion":"http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