{"data":{"id":"10.6084/m9.figshare.1024614","type":"dois","attributes":{"doi":"10.6084/m9.figshare.1024614","prefix":"10.6084","suffix":"m9.figshare.1024614","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"Weitemier, Kevin","nameType":"Personal","givenName":"Kevin","familyName":"Weitemier","affiliation":[],"nameIdentifiers":[]},{"name":"Straub, Shannon","nameType":"Personal","givenName":"Shannon","familyName":"Straub","affiliation":[],"nameIdentifiers":[]},{"name":"Cronn, Richard","nameType":"Personal","givenName":"Richard","familyName":"Cronn","affiliation":[],"nameIdentifiers":[]},{"name":"Fishbein, Mark","nameType":"Personal","givenName":"Mark","familyName":"Fishbein","affiliation":[],"nameIdentifiers":[]},{"name":"Schmickl, Roswitha","nameType":"Personal","givenName":"Roswitha","familyName":"Schmickl","affiliation":[],"nameIdentifiers":[]},{"name":"McDonnell, Angela","nameType":"Personal","givenName":"Angela","familyName":"McDonnell","affiliation":[],"nameIdentifiers":[]},{"name":"Liston, Aaron","nameType":"Personal","givenName":"Aaron","familyName":"Liston","affiliation":[],"nameIdentifiers":[{"schemeUri":"https://orcid.org","nameIdentifier":"https://orcid.org/0000-0002-3020-6400","nameIdentifierScheme":"ORCID"}]}],"titles":[{"title":"Weitemier et al. Hyb-Seq for phylogenomics in plants"}],"publisher":"figshare","container":{},"publicationYear":2014,"subjects":[{"subject":"Plant Biology"},{"subject":"FOS: Biological sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"FOS: Biological sciences","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Botany"},{"subject":"Biological Techniques"},{"subject":"Evolutionary Biology"}],"contributors":[],"dates":[{"date":"2014-05-13","dateType":"Created"},{"date":"2014-08-22","dateType":"Updated"},{"date":"2014","dateType":"Issued"}],"language":null,"types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[],"relatedItems":[],"sizes":["38713892 Bytes"],"formats":[],"version":null,"rightsList":[{"rights":"Creative Commons Attribution 4.0 International","rightsUri":"https://creativecommons.org/licenses/by/4.0/legalcode","schemeUri":"https://spdx.org/licenses/","rightsIdentifier":"cc-by-4.0","rightsIdentifierScheme":"SPDX"}],"descriptions":[{"description":"Hyb-Seq data matrices used by Weitemier et al. for phylogenomic analyses of \u003cem\u003eAsclepias. \u003c/em\u003e Weitemier_et_al_Asclepias_syriaca_single_copy_gene_exons.fasta contains the sequences of the targeted exons used for probe design. Weitemier_et_al_plastome.phy contains the whole plastome matrix. Weitemier_et_al_nuclear_concatenated.phy contains a concatenation of all 768 putatively single-copy gene matrices. Weitemier_et_al_nuclear_gene_matrices.tgz is a gzipped tarball of the 768 individual matrices for the putatively single-copy genes. Note that the exons of each gene are concatenated in no particular order. Weitemier_et_al_nuclear_concatenated.tre contains the best ML tree for the concatenation matrix with bootstrap support values. Weitemier_et_al_plastome.tre contains the best ML tree for the plastome matrix with bootstrap support values. Weitemier_et_al_nuclear_gene_trees.tgz contains the bootstrap trees from the ML analysis of each nuclear gene. Weitemier_et_al_MP-EST_species_tree.tre contains the MP-EST species tree with bootstrap values.","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"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","url":"https://figshare.com/articles/dataset/Weitemier_et_al_Hyb_Seq_for_phylogenomics_in_plants/1024614","contentUrl":null,"metadataVersion":1,"schemaVersion":"http://datacite.org/schema/kernel-4","source":"mds","isActive":true,"state":"findable","reason":null,"viewCount":0,"viewsOverTime":[],"downloadCount":0,"downloadsOverTime":[],"referenceCount":0,"citationCount":0,"citationsOverTime":[],"partCount":0,"partOfCount":0,"versionCount":0,"versionOfCount":0,"created":"2014-07-01T17:23:14.000Z","registered":"2014-07-01T17:23:15.000Z","published":"2014","upd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