{"data":{"id":"10.4121/99ea2016-5ee1-4be7-b754-4e0bd87c1f1e","type":"dois","attributes":{"doi":"10.4121/99ea2016-5ee1-4be7-b754-4e0bd87c1f1e","prefix":"10.4121","suffix":"99ea2016-5ee1-4be7-b754-4e0bd87c1f1e","identifiers":[],"alternateIdentifiers":[],"creators":[{"name":"van der Ham, Stijn","nameType":"Personal","givenName":"Stijn","familyName":"van der Ham","nameIdentifiers":[{"nameIdentifier":"0009-0005-6765-1275","nameIdentifierScheme":"https://orcid.org/"}],"affiliation":[]},{"name":"Vutukuri, Hanumantha Rao","nameType":"Personal","givenName":"Hanumantha Rao","familyName":"Vutukuri","nameIdentifiers":[{"nameIdentifier":"0000-0001-6255-2298","nameIdentifierScheme":"https://orcid.org/"}],"affiliation":[]}],"titles":[{"title":"Data underlying Chapter 5 “Dynamic Bidirectional Coupling of Membrane Morphology and Rod Organization in Flexible Vesicles”, in the PhD thesis: Particle–Membrane Interactions in Biomimetic Vesicles : From Engulfment to Flexible Confinement"}],"publisher":"4TU.ResearchData","container":{},"publicationYear":2026,"subjects":[{"subject":"Condensed Matter Physics","subjectScheme":"Australian and New Zealand Standard Research Classification (ANZSRC), 2008","classificationCode":"0204"},{"subject":"FOS: Physical sciences","schemeUri":"http://www.oecd.org/science/inno/38235147.pdf","subjectScheme":"Fields of Science and Technology (FOS)"},{"subject":"Physical Sciences","subjectScheme":"Australian and New Zealand Standard Research Classification (ANZSRC), 2008","classificationCode":"02"},{"subject":"colloidal liquid crystals"},{"subject":"giant unilamellar vesicles"},{"subject":"flexible confinement"},{"subject":"shape anisotropy"}],"contributors":[{"name":"University of Twente, MESA+ Institute, Faculty of Science and Technology, Active Soft Matter and Bio-inspired Materials Lab","nameType":"Organizational","affiliation":[],"contributorType":"Other","nameIdentifiers":[]}],"dates":[{"date":"2026-06-24","dateType":"Issued"}],"language":"en","types":{"ris":"DATA","bibtex":"misc","citeproc":"dataset","schemaOrg":"Dataset","resourceType":"Dataset","resourceTypeGeneral":"Dataset"},"relatedIdentifiers":[{"relationType":"IsSupplementTo","relatedIdentifier":"10.3990/1.9789036571975","relatedIdentifierType":"DOI"},{"relationType":"References","relatedIdentifier":"https://doi.org/10.1073/pnas.2604848123","relatedIdentifierType":"URL"},{"relationType":"IsVersionOf","relatedIdentifier":"10.4121/99ea2016-5ee1-4be7-b754-4e0bd87c1f1e.v1","relatedIdentifierType":"DOI"},{"relationType":"IsVersionOf","relatedIdentifier":"10.4121/99ea2016-5ee1-4be7-b754-4e0bd87c1f1e.v2","relatedIdentifierType":"DOI"}],"relatedItems":[],"sizes":[],"formats":["Figure/.ai/.pdf/.svg Plot/.svg Script/.ipynb Spreadsheet/.xlsx/.csv Data/.txt/.stl/.ply/.dat 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published as: Dynamic bidirectional coupling of membrane morphology and rod organization in flexible vesicles (https://doi.org/10.1073/pnas.2604848123)\u003cbr\u003e\u003cbr\u003e***Methodology***\u003cbr\u003eAll data processing and analysis steps are described in detail in the Methods section of the corresponding chapter in the thesis.\u003cbr\u003eAnalysis codes in the dataset can be run as is, with the exception of updating certain paths/parameters as indicated in the analysis codes.\u003cbr\u003e\u003cbr\u003e***Organization of the dataset***\u003cbr\u003eThe data is organized per figure, numbered according to the thesis, with supporting figures preceded by the capital letter 'S'. \u003cbr\u003eWithin each figure folder, data is ordered as:\u003cbr\u003e- \u003cstrong\u003eFigure files:\u003c/strong\u003e final figure files, provided in several formats (.ai file, .pdf file, .svg file)\u003cbr\u003e- \u003cstrong\u003eRaw data folder:\u003c/strong\u003e raw data underlying the figure (simulation snapshots and microscopy images in the form of .tiff images/stacks/series and .png files)\u003cbr\u003e- \u003cstrong\u003eAnalysis folder:\u003c/strong\u003e analysis codes underlying the figure, data required for the analyses code, and codes for the generation of the plots (jupyter notebooks, .svg files for generated figures.)","descriptionType":"Abstract"}],"geoLocations":[],"fundingReferences":[],"xml":"PD94bWwgdmVyc2lvbj0iMS4wIiBlbmNvZGluZz0iVVRGLTgiPz4KPHJlc291cmNlIHhtbG5zPSJodHRwOi8vZGF0YWNpdGUub3JnL3NjaGVtYS9rZXJuZWwtNCIgeG1sbnM6eHNpPSJodHRwOi8vd3d3LnczLm9yZy8yMDAxL1hNTFNjaGVtYS1pbnN0YW5jZSIgeHNpOnNjaGVtYUxvY2F0aW9uPSJodHRwOi8vZGF0YWNpdGUub3JnL3NjaGVtYS9rZXJuZWwtNCBodHRwOi8vc2NoZW1hLmRhdGFjaXRlLm9yZy9tZXRhL2tlcm5lbC00LjQvbWV0YWRhdGEueHNkIj4KICA8aWRlbnRpZmllciBpZGVudGlmaWVyVHlwZT0iRE9JIj4xMC40MTIxLzk5RUEyMDE2LTVFRTEtNEJFNy1CNzU0LTRFMEJEODdDMUYxRTwvaWRlbnRpZmllcj4KICA8Y3JlYXRvcnM+CiAgICA8Y3JlYXRvcj4KICAgICAgPGNyZWF0b3JOYW1lIG5hbWVUeXBlPSJQZXJzb25hbCI+Uy4gTC4gdmFuIGRlciBIYW08L2NyZWF0b3JOYW1lPgogICAgICA8Z2l2ZW5OYW1lPlN0aWpuPC9naXZlbk5hbWU+CiAgICAgIDxmYW1pbHlOYW1lPnZhbiBkZXIgSGFtPC9mYW1pbHlOYW1lPgogICAgICA8bmFtZUlkZW50aWZpZXIgbmFtZUlkZW50aWZpZXJTY2hlbWU9Imh0dHBzOi8vb3JjaWQub3JnLyI+MDAwOS0wMDA1LTY3NjUtMTI3NTwvbmFtZUlkZW50aWZpZXI+CiAgICA8L2NyZWF0b3I+CiAgICA8Y3JlYXRvcj4KICAgICAgPGNyZWF0b3JOYW1lIG5hbWVUeXBlPSJQZXJzb25hbCI+SGFudW1hbnRoYSBSYW8gVnV0dWt1cmk8L2NyZWF0b3JOYW1lPgogICAgICA8Z2l2ZW5OYW1lPkhhbnVtYW50aGEgUmFvPC9naXZlbk5hbWU+CiAgICAgIDxmYW1pbHlOYW1lPlZ1dHVrdXJpPC9mYW1pbHlOYW1lPgogICAgICA8bmFtZUlkZW50aWZpZXIgbmFtZUlkZW50aWZpZXJTY2hlbWU9Imh0dHBzOi8vb3JjaWQub3JnLyI+MDAwMC0wMDAxLTYyNTUtMjI5ODwvbmFtZUlkZW50aWZpZXI+CiAgICA8L2NyZWF0b3I+CiAgPC9jcmVhdG9ycz4KICA8dGl0bGVzPgogICAgPHRpdGxlPkRhdGEgdW5kZXJseWluZyBDaGFwdGVyIDUg4oCcRHluYW1pYyBCaWRpcmVjdGlvbmFsIENvdXBsaW5nIG9mIE1lbWJyYW5lIE1vcnBob2xvZ3kgYW5kIFJvZCBPcmdhbml6YXRpb24gaW4gRmxleGlibGUgVmVzaWNsZXPigJ0sIGluIHRoZSBQaEQgdGhlc2lzOiBQYXJ0aWNsZeKAk01lbWJyYW5lIEludGVyYWN0aW9ucyBpbiBCaW9taW1ldGljIFZlc2ljbGVzIDogRnJvbSBFbmd1bGZtZW50IHRvIEZsZXhpYmxlIENvbmZpbmVtZW50PC90aXRsZT4KICA8L3RpdGxlcz4KICA8cHVibGlzaGVyPjRUVS5SZXNlYXJjaERhdGE8L3B1Ymxpc2hlcj4KICA8cHVibGljYXRpb25ZZWFyPjIwMjY8L3B1YmxpY2F0aW9uWWVhcj4KICA8cmVzb3VyY2VUeXBlIHJlc291cmNlVHlwZUdlbmVyYWw9IkRhdGFzZXQiPkRhdGFzZXQ8L3Jlc291cmNlVHlwZT4KICA8c3ViamVjdHM+CiAgICA8c3ViamVjdCBzdWJqZWN0U2NoZW1lPSJBdXN0cmFsaWFuIGFuZCBOZXcgWmVhbGFuZCBTdGFuZGFyZCBSZXNlYXJjaCBDbGFzc2lmaWNhdGlvbiAoQU5aU1JDKSwgMjAwOCIgY2xhc3NpZmljYXRpb25Db2RlPSIwMjA0Ij5Db25kZW5zZWQgTWF0dGVyIFBoeXNpY3M8L3N1YmplY3Q+CiAgICA8c3ViamVjdCBzdWJqZWN0U2NoZW1lPSJBdXN0cmFsaWFuIGFuZCBOZXcgWmVhbGFuZCBTdGFuZGFyZCBSZXNlYXJjaCBDbGFzc2lmaWNhdGlvbiAoQU5aU1JDKSwgMjAwOCIgY2xhc3NpZmljYXRpb25Db2RlPSIwMiI+UGh5c2ljYWwgU2NpZW5jZXM8L3N1YmplY3Q+CiAgICA8c3ViamVjdD5jb2xsb2lkYWwgbGlxdWlkIGNyeXN0YWxzPC9zdWJqZWN0PgogICAgPHN1YmplY3Q+Z2lhbnQgdW5pbGFtZWxsYXIgdmVzaWNsZXM8L3N1YmplY3Q+CiAgICA8c3ViamVjdD5mbGV4aWJsZSBjb25maW5lbWVudDwvc3ViamVjdD4KICAgIDxzdWJqZWN0PnNoYXBlIGFuaXNvdHJvcHk8L3N1YmplY3Q+CiAgPC9zdWJqZWN0cz4KICA8Y29udHJpYnV0b3JzPgogICAgPGNvbnRyaWJ1dG9yIGNvbnRyaWJ1dG9yVHlwZT0iT3RoZXIiPgogICAgICA8Y29udHJpYnV0b3JOYW1lIG5hbWVUeXBlPSJPcmdhbml6YXRpb25hbCI+VW5pdmVyc2l0eSBvZiBUd2VudGUsIE1FU0ErIEluc3RpdHV0ZSwgRmFjdWx0eSBvZiBTY2llbmNlIGFuZCBUZWNobm9sb2d5LCBBY3RpdmUgU29mdCBNYXR0ZXIgYW5kIEJpby1pbnNwaXJlZCBNYXRlcmlhbHMgTGFiPC9jb250cmlidXRvck5hbWU+CiAgICA8L2NvbnRyaWJ1dG9yPgogIDwvY29udHJpYnV0b3JzPgogIDxkYXRlcz4KICAgIDxkYXRlIGRhdGVUeXBlPSJJc3N1ZWQiPjIwMjYtMDYtMjQ8L2RhdGU+CiAgPC9kYXRlcz4KICA8bGFuZ3VhZ2U+ZW48L2xhbmd1YWdlPgogIDxyZWxhdGVkSWRlbnRpZmllcnM+CiAgICA8cmVsYXRlZElkZW50aWZpZXIgcmVsYXRlZElkZW50aWZpZXJUeXBlPSJET0kiIHJlbGF0aW9uVHlwZT0iSXNTdXBwbGVtZW50VG8iPjEwLjM5OTAvMS45Nzg5MDM2NTcxOTc1PC9yZWxhdGVkSWRlbnRpZmllcj4KICAgIDxyZWxhdGVkSWRlbnRpZmllciByZWxhdGVkSWRlbnRpZmllclR5cGU9IlVSTCIgcmVsYXRpb25UeXBlPSJSZWZlcmVuY2VzIj5odHRwczovL2RvaS5vcmcvMTAuMTA3My9wbmFzLjI2MDQ4NDgxMjM8L3JlbGF0ZWRJZGVudGlmaWVyPgogICAgPHJlbGF0ZWRJZGVudGlmaWVyIHJlbGF0ZWRJZGVudGlmaWVyVHlwZT0iRE9JIiByZWxhdGlvblR5cGU9IklzVmVyc2lvbk9mIj4xMC40MTIxLzk5ZWEyMDE2LTVlZTEtNGJlNy1iNzU0LTRlMGJkODdjMWYxZS52MTwvcmVsYXRlZElkZW50aWZpZXI+CiAgICA8cmVsYXRlZElkZW50aWZpZXIgcmVsYXRlZElkZW50aWZpZXJUeXBlPSJET0kiIHJlbGF0aW9uVHlwZT0iSXNWZXJzaW9uT2YiPjEwLjQxMjEvOTllYTIwMTYtNWVlMS00YmU3LWI3NTQtNGUwYmQ4N2MxZjFlLnYyPC9yZWxhdGVkSWRlbnRpZmllcj4KICA8L3JlbGF0ZWRJZGVudGlmaWVycz4KICA8Zm9ybWF0cz4KICAgIDxmb3JtYXQ+RmlndXJlLy5haS8ucGRmLy5zdmcgUGxvdC8uc3ZnIFNjcmlwdC8uaXB5bmIgU3ByZWFkc2hlZXQvLnhsc3gvLmNzdiBEYXRhLy50eHQvLnN0bC8ucGx5Ly5kYXQgSW1hZ2UvLnRpZmYvLnBuZzwvZm9ybWF0PgogIDwvZm9ybWF0cz4KICA8dmVyc2lvbj4yPC92ZXJzaW9uPgogIDxyaWdodHNMaXN0PgogICAgPHJpZ2h0cyByaWdodHNVUkk9Imh0dHBzOi8vY3JlYXRpdmVjb21tb25zLm9yZy9saWNlbnNlcy9ieS80LjAvIj5DQyBCWSA0LjA8L3JpZ2h0cz4KICA8L3JpZ2h0c0xpc3Q+CiAgPGRlc2NyaXB0aW9ucz4KICAgIDxkZXNjcmlwdGlvbiBkZXNjcmlwdGlvblR5cGU9IkFic3RyYWN0Ij4mbHQ7cCZndDtUaGlzIGRhdGFzZXQgYmVsb25ncyB0byBDaGFwdGVyIDUgb2YgdGhlIFBoRCB0aGVzaXMgb2YgU3Rpam4gdmFuIGRlciBIYW0gKDIwMjYpLiAmbHQ7L3AmZ3Q7Jmx0O3AmZ3Q7Jmx0O2JyJmd0OyZsdDsvcCZndDsmbHQ7cCZndDtBdXRob3JzOiBTdGlqbiB2YW4gZGVyIEhhbSwgSGFudW1hbnRoYSBSYW8gVnV0dWt1cmkmbHQ7L3AmZ3Q7Jmx0O3AmZ3Q7Jmx0O2JyJmd0OyZsdDsvcCZndDsmbHQ7cCZndDtBY3RpdmUgU29mdCBNYXR0ZXIgYW5kIEJpby1pbnNwaXJlZCBNYXRlcmlhbHMgTGFiLCBGYWN1bHR5IG9mIFNjaWVuY2UgYW5kIFRlY2hub2xvZ3ksIE1FU0ErIEluc3RpdHV0ZSwgVW5pdmVyc2l0eSBvZiBUd2VudGUsIEVuc2NoZWRlLCBUaGUgTmV0aGVybGFuZHMmbHQ7L3AmZ3Q7Jmx0O3AmZ3Q7Jmx0O2JyJmd0OyZsdD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